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RIKEN

田原分子分光研究室 Molecular Spectroscopy Laboratory

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Publications - Original papers

[Original papers] [Reviews & Books] [Patents]

2019

[145] Satoshi Nihonyanagi; Atsushi Sayama; Yasuhiro Ohshima; Tahei Tahara
In-situ referencing method for heterodyne-detected vibrational sum frequency generation measurements at liquid/metal interfaces
Chemistry Letters, 48, 1387 - 1390, 2019. DOI: 10.1246/cl.190606
[144] S. Tahara; H. Kuramochi; S. Takeuchi; T. Tahara
Protein dynamics preceding photoisomerization of the retinal chromophore in bacteriorhodopsin revealed by deep-UV femtosecond stimulated Raman spectroscopy
J. Phys. Chem. Lett., 10, 5422 - 5427, 2019. DOI: 10.1021/acs.jpclett.9b02283
[143] T. Otosu; K. Ishii; T. Tahara
Multifocus fluorescence correlation spectroscopy with spatially separated excitation beams
Bull. Chem. Soc. Jpn., 92, 9, 1495 - 1502, 2019. DOI: 10.1246/bcsj.20190109
[142] S. Bidyut; K. Ishii; T. Tahara
Microsecond conformational dynamics of biopolymer revealed by dynamic-quenching two-dimensional fluorescence lifetime spectroscopy with single dye-labelling
J. Phys. Chem. Lett., 10, 5536 - 5541, 2019. DOI: 10.1021/acs.jpclett.9b01513
[141] K. Matsuzaki; S. Nihonyanagi; S. Yamaguchi; T. Nagata; T. Tahara
Quadrupolar mechanism for vibrational sum frequency generation at air/liquid interfaces: Theory and experiment
J. Chem. Phys., 151, 6, 064701, 2019. DOI: 10.1063/1.5088192
[140] L. Wang; S. Nihonyanagi; K. Inoue; K. Nishikawa; A. Morita; S. Ye; T. Tahara
Effect of frequency-dependent fresnel factor on the vibrational sum frequency generation spectra for liquid/solid interfaces
J. Phys. Chem. C, 123, 15665 - 15673, 2019. DOI: 10.1021/acs.jpcc.9b04043
[139] H. Kuramochi; S. Takeuchi; H. Kamikubo; M. Kataoka; T. Tahara
Fifth-order time-domain Raman spectroscopy of photoactive yellow protein for visualizing vibrational coupling in its excited state
Sci. Adv., 5, 6, eaau4490, 2019. DOI: 10.1126/sciadv.aau4490
[138] S. Tahara; M. Singh; H. Kuramochi; W. Shihoya; K. Inoue; O. Kureki; O. BÉJÀ; Y. Mizutani; H. Kandori; T. Tahara
Ultrafast dynamics of heliorhodopsins
J. Phys. Chem. B, 123, 11, 2507 - 2512, 2019. DOI: 10.1021/acs.jpcb.9b00887
[137] K. Inoue; A. Mohammed; S. Nihonyanagi; T. Tahara
Effect of hydrogen-bond on ultrafast spectral diffusion dynamics of water at charged monolayer interfaces
J. Chem. Phys., 150, 054705, 2019. DOI: 10.1063/1.5081077

2018

[136] M. Iwamura; K. Kimoto; K. Nozaki; H. Kuramochi; S. Takeuchi; T. Tahara
Metal–Metal Bond Formations in [Au(CN)2–]n (n = 3–5) Oligomers in Water Identified by Coherent Nuclear Wavepacket Motions
J. Phys. Chem. Lett., 9, 7085 - 7089, 2018. DOI: 10.1021/acs.jpclett.8b03139
[135] H. Kuramochi; S. Takeuchi; T. Tahara
Ultrafast photodissociation dynamics of diphenylcyclopropenone studied by time-resolved impulsive stimulated Raman spectroscopy
Chem. Phys., 512, 88 - 92, 2018. DOI: 10.1016/j.chemphys.2018.02.023
[134] Matthew M. Sartin; Woongmo Sung; Satoshi Nihonyanagi; Tahei Tahara
Molecular mechanism of charge inversion revealed by polar orientation of interfacial water molecules: A heterodyne-detected vibrational sum frequency generation study
J. Chem. Phys., 149, 2, 024703 - 024703, 2018. DOI: 10.1063/1.5024310
[133] Shu-hei Urashima; Anton Myalitsin; Satoshi Nihonyanagi; Tahei Tahara
The topmost water structure at a charged silica/aqueous interface revealed by heterodyne-detected vibrational sum frequency generation spectroscopy
J. Phys. Chem. Lett., 9, 4109 - 4114, 2018. DOI: 10.1021/acs.jpclett.8b01650
[132] K. Inoue; S. Tahara; Y. Kato; S. Takeuchi; T. Tahara; H. Kandori
Spectroscopic study of proton transfer mechanism of inward proton pump rhodopsin, Parvularcula oceani xenorhodopsin
J. Phys. Chem. B, 122, 25, 6453 - 6461, 2018. DOI: 10.1021/acs.jpcb.8b01279
[131] S. Tahara; S. Takeuchi; R. Abe-Yoshizumi; K. Inoue; H. Ohtani; H. Kandori; T. Tahara
Origin of the reactive and nonreactive excited states in the primary reaction of rhodopsins: pH depencence of femtosecond absorption of light-driven sodium ion pump rhodopsion KR2
J. Phys. Chem. B, 122, 18, 4784 - 4792, 2018. DOI: 10.1021/acs.jpcb.8b01934
[130] T. Tahara; A. Kitao; Y. Mizutani; H. Kandori; M. Fujii
Complex molecular systems: a frontier of molecular science
Phys. Chem. Chem. Phys., 20, 2945 - 2946, 2018. DOI: 10.1039/C8CP90010H
[129] R. Kusaka; T. Ishiyama; S. Nihonyanagi; A. Morita; T. Tahara
Structure at the air/water interface in the presence of phenol: A study by heterodyne-detected vibrational sum frequency generation and molecular dynamics simulation
Phys. Chem. Chem. Phys., 20, 5, 3002 - 3009, 2018. DOI: 10.1039/C7CP05150F
[128] J. B. Swadling; K. Ishii; T. Tahara; A. Kitao
Origins of biological function in DNA and RNA hairpin loop motifs from replica exchange molecular dynamics simulation
Phys. Chem. Chem. Phys., 20, 5, 2990 - 3001, 2018. DOI: 10.1039/c7cp06355

2017

[127] K. Inoue; P. C. Singh; S. Nihonyanagi; S. Yamaguchi; T. Tahara
Cooperative hydrogen-bond dynamics at a zwitterionic lipid/water interface revealed by 2D HD-VSFG spectroscopy
J. Phys. Chem. Lett., 8, 5160 - 5165, 2017. DOI: 10.1021/acs.jpclett.7b02057
[126] W. Pao; K. Hanaoka; T. Fujisawa; S. Takeuchi; T. Komatsu; T. Ueno; T. Terai; T. Tahara; T. Nagano; Y. Urano
Development of an azo-based photosensitizer activated under mild hypoxia for photodynamic therapy
J. Am. Chem. Soc., 139, 39, 13713 - 13719, 2017. DOI: 10.1021/jacs.7b05019
[125] T. Otosu; K. Ishii; H. Oikawa; M. Arai; S. Takahashi; T. Tahara
Highly heterogeneous nature of the native and unfolded states of the B domain of protein A revealed by two-dimensional fluorescence lifetime correlation spectroscopy
J. Phys. Chem. B, 121, 22, 5463 - 5473, 2017. DOI: 10.1021/acs.jpcb.7b00546
[124] S. Devineau; K. Inoue; R. Kusaka; S. Urashima; S. Nihonyanagi; D. Baigl; A. Tsuneshige; T. Tahara
Change of hemoglobin isoelectric point at the air/water interface probed by the orientational flip-flop of water molecules
Phys. Chem. Chem. Phys., 19, 10292 - 10300, 2017. DOI: 10.1039/C6CP08854F
[123] A. Niho; S. Yoshizawa; T. Tsukamoto; M. Kurihara; S. Tahara; Y. Nakajima; M. Mizuno; H. Kuramochi; T. Tahara; Y. Mizutani; Y. Sudo
Demonstration of a light-driven SO42- transporter and its spectroscopic characteristics
J. Am. Chem. Soc., 139, 4376 - 4389, 2017. DOI: 10.1021/jacs.6b12139
[122] H. Kuramochi; T. Fujisawa; S. Takeuchi; T. Tahara
Broadband stimulated Raman spectroscopy in the deep ultraviolet region
Chem. Phys. Lett., 683, 543 - 546, 2017. DOI: 10.1016/j.cplett.2017.02.015
[121] H. Kuramochi; S. Takeuchi; K. Yonezawa; H. Kamikubo; M. Kataoka; T. Tahara
Probing the early stages of photoreception in photoactive yellow protein with ultrafast time-domain Raman spectroscopy
Nat. Chem., 9, 7, 660 - 666, 2017. DOI: 10.1038/nchem.2717
[120] F. N. Shin; K. Hanaoka; W. Piao; T. Miyakawa; T. Fujisawa; S. Takeuchi; S. Takahashi; T. Komatsu; T. Ueno; T. Terai; T. Tahara; M. Tanokura; T. Nagano; Y. Urano
Development of an azoreductase-based reporter system with synthetic fluorogenic substrates
ACS Chem. Biol., 12, 2, 558 - 563, 2017. DOI: 10.1021/acschembio.6b00852
[119] M. M. Sartin; K. Kondo; M. Yoshizawa; S. Takeuchi; T. Tahara
Local environment inside a novel aromatic micelle investigated by steady-state and femtosecond fluorescence spectroscopy of an encapsulated solvatochromic probe
Phys. Chem. Chem. Phys., 19, 757 - 765, 2017. DOI: 10.1039/C6CP06174E

2016

[118] Y. Harabuchi; R. Yamamoto; S. Maeda; S. Takeuchi; T. Tahara; T. Taketsugu
Ab initio molecular dynamics study on photoreaction of 1,1′-dimethylstilbene upon S0 → S1 excitation
J. Phys. Chem. A, 120, 44, 8804 - 8812, 2016. DOI: 10.1021/acs.jpca.6b07548
[117] A. Adhikari; S. Re; W. Nishima; M. Ahmed; S. Nihonyanagi; J. B. Klauda; Y. Sugita; T. Tahara
Water orientation at ceramide/water interfaces studied by heterodyne-detected vibrational sum frequency generation spectroscopy and molecular dynamics simulation
J. Phys. Chem. C, 120, 41, 23692 - 23697 , 2016. DOI: 10.1021/acs.jpcc.6b08980
[116] P. C. Singh; K. Inoue; S. Nihonyanagi; S. Yamaguchi; T. Tahara
Femtosecond hydrogen-bond dynamics of bulk-like and bound water at positively and negatively charged lipid interfaces revealed by 2D HD-VSFG spectroscopy
Angew. Chem. Int. Ed., 55, 10621 - 10625, 2016. DOI: 10.1002/anie.201603676
[115] A. Kundu; S. Tanaka; T. Ishiyama; A. Mohammed; K. Inoue; S. Nihonyanagi; H. Sawai; S. Yamaguchi; A. Morita; T. Tahara
Bend vibration of surface water investigated by heterodyne-detected sum frequency generation and theoretical study: Dominant role of quadrupole
J. Phys. Chem. Lett., 7, 13, 2597 - 2601, 2016. DOI: 10.1021/acs.jpclett.6b00657
[114] K. Matsuzaki; R. Kusaka; S. Nihonyanagi; S. Yamaguchi; T. Nagata; T. Tahara
Partially hydrated electrons at the air/water interface observed by UV-excited time-resolved heterodyne-detected vibrational sum frequency generation spectroscopy
J. Am. Chem. Soc., 138, 7551 - 7557, 2016. DOI: 10.1021/jacs.6b02171
[113] K. Inoue; T. Ishiyama; S. Nihonyanagi; S. Yamaguchi; A. Morita; T. Tahara
Efficient spectral diffusion at the air/water interface revealed by femtosecond time-resolved heterodyne-detected vibrational sum frequency generation spectroscopy
J. Phys. Chem. Lett., 7, 1811 - 1815, 2016. DOI: 10.1021/acs.jpclett.6b00701
[112] A. Myalitsin; S. Urashima; S. Nihonyanagi; S. Yamaguchi; T. Tahara
Water structure at the buried silica/aqueous interface studied by heterodyne-detected vibrational sum-frequency generation
J. Phys. Chem. C, 120, 9357 - 9363, 2016. DOI: 10.1021/acs.jpcc.6b03275
[111] H. Kuramochi; S. Takeuchi; T. Tahara
Femtosecond time-resolved impulsive stimulated Raman spectroscopy using sub-7-fs pulses: Apparatus and applications
Rev. Sci. Instrum., 87, 043107, 1 - 10, 2016. DOI: 10.1063/1.4945259
[110] T. Fujisawa; H. Kuramochi; H. Hosoi; S. Takeuchi; T. Tahara
Role of coherent low frequency motion in excited state proton transfer of green fluorescenct protein studied by time-resolved impulsive Raman spectroscopy
J. Am. Chem. Soc., 138, 3942 - 3945, 2016. DOI: 10.1021/jacs.5b11038
[109] M. Iwamura; R. Wakabayashi; J. Maeda; K. Nozaki; S. Takeuchi; T. Tahara
Coherent vibration and ultrafast dynamics upon bond formation in excited dimers of Au(I) complex
Phys. Chem. Chem. Phys., 18, 5103 - 5107, 2016. DOI: 10.1039/C5CP06651D

2015

[108] K. Ishii; T. Tahara
Correction of the afterpulsing effect in fluorescence correlation spectroscopy using time symmetry analysis
Opt. Express., 23, 32387 - 32400, 2015. DOI: 10.1364/OE.23.032387
[107] S. Tahara; S. Takeuchi; R. Abe-Yoshizumi; K. Inoue; H. Ohtani; H. Kandori; T. Tahara
Ultrafast photoreaction dynamics of a light-driven sodium-ion-pumping retinal protein from Krokinobacter eikastus revealed by femtosecond time-resolved absorption spectroscopy
J. Phys. Chem. Lett., 6, 4481 - 4486, 2015. DOI: 10.1021/acs.jpclett.5b01994
[106] S. K. Mondal; K. Inoue; S. Yamaguchi; T. Tahara
Anomalous effective polarity of an air/liquid-mixture interface: a heterodyne-detected electronic and vibrational sum frequency generation study
Phys. Chem. Chem. Phys., 17, 23720 - 23723, 2015. DOI: 10.1039/C5CP04264J
[105] S. Nihonyanagi; R. Kusaka; K. Inoue; A. Adhikari; S. Yamaguchi; T. Tahara
Accurate determination of complex χ(2) spectrum of the air/water interface
J. Chem. Phys., 143, 124707 - 124710, 2015. DOI: 10.1063/1.4931485
[104] M. Yamashina; M. M. Sartin; Y. Sei; M. Akita; S. Takeuchi; T. Tahara; M. Yoshizawa
Preparation of highly fluorescent host-guest complexes with tunable color upon encapsulation
J. Am. Chem. Soc., 137, 9266 - 9269, 2015. DOI: 10.1021/jacs.5b06195
[103] T. Otosu; K. Ishii; T. Tahara
Microsecond protein dynamics observed at the single molecule level
Nat. Commun., 6, 7685, 1 - 9, 2015. DOI: 10.1038/ncomms8685
[102] H. Hosoi; R. Tayama; S. Takeuchi; T. Tahara
Solvent dependence of two-photon absorption spectra of the enhanced green fluorescent protein (eGFP) chromophore
Chem. Phys. Lett., 630, 32 - 36, 2015. DOI: 10.1016/j.cplett.2015.04.028
[101] K. Inoue; S. Nihonyanagi; P. Singh; S. Yamaguchi; T. Tahara
2D heterodyne-detected sum frequency generation study on the ultrafast vibrational dynamics of H2O and HOD water at charge interfaces
J. Chem. Phys., 142, 212431, 1 - 12, 2015. DOI: 10.1063/1.4918644
[100] T. Ishiyama; A. Morita; T. Tahara
Molecular dynamics study of two-dimensional sum frequency generation spectra at vapor/water interface
J. Chem. Phys., 142, 212407, 1 - 13, 2015. DOI: 10.1063/1.4914299
[99] L. Hua; M. Iwamura; S. Takeuchi; T. Tahara
The substituent effect on the MLCT excited state dynamics of Cu(I) complexes studied by femtosecond time-resolved absorption and observation of coherent nuclear wavepacket motion
Phys. Chem. Chem. Phys., 17, 2067 - 2077, 2015. DOI: 10.1039/C4CP03843F

2014

[98] S. Re, W. Nishima; T. Tahara; Y. Sugita
A mosaic of water orientation structures at a neutral zwitterion lipid/water interface revealed by molecular dynamics simulations
J. Phys. Chem. Lett., 5, 4343 - 4348, 2014. DOI: 10.1021/jz502299m
[97] T. Fujisawa; S. Takeuchi; S. Masuda; T. Tahara
Signaling-state formation mechanism of a BLUF protein PapB from the Purple Bacterium Rhodopseudomonas palustris studied by femtosecond time-resolved absorption spectroscopy
J. Phys. Chem. B., 118, 14761 - 14773, 2014. DOI: 10.1021/jp5076252
[96] P. Singh; S. Nihonyanagi; S. Yamaguchi; T. Tahara
Interfacial water in the vicinity of a positively charged interface studied by steady-state and time-resolved heterodyne-detected vibrational sum frequency generation
J. Chem. Phys., 141, 18C527, 1 - 7, 2014. DOI: 10.1063/1.4897265
[95] S. Nihonyanagi; S. Yamaguchi; T. Tahara
Counterion effect on interfacial water at charged interfaces and its relevance to the Hofmeister series
J. Am. Chem. Soc., 136, 6155 - 6158, 2014. DOI: 10.1021/ja412952y
[94] M. Osawa
Highly efficient blue-green delayed fluorescence from copper(I) thiolate complexes: luminescence color alteration by orientation change of the aryl ring
Chem. Commun., 50, 1801 - 1803, 2014. DOI: 10.1039/C3CC47871H
[93] A. Kundu; S. Yamaguchi; T. Tahara
Evaluation of pH at charged lipid/water interfaces by heterodyne-detected electronic sum frequency generation
J. Phys. Chem. Lett., 5, 762 - 766, 2014. DOI: 10.1021/jz500107e
[92] Y. Sudo; M. Mizuno; Z. Wei; S. Takeuchi; T. Tahara; Y. Mizutani
The early steps in the photocycle of a photosensor protein Sensory Rhodopsin I from Salinibacter ruber
J. Phys. Chem. B, 118, 1510 - 1518, 2014. DOI: 10.1021/jp4112662
[91] M. Iwamura; S. Takeuchi; T. Tahara
Substituent Effect on the Photoinduced Structural Change of Cu(I) Complexes Observed by Femtosecond Emission Spectroscopy
Phys. Chem. Chem. Phys., 16, 4143 - 4154, 2014. DOI: 10.1039/c3cp54322f

2013

[90] P. Singh; S. Nihonyanagi; S. Yamaguchi; T. Tahara
Ultrafast vibrational dynamics of hydrogen bond network terminated at the air/water interface: A two-dimensional heterodyne-detected vibrational sum frequency generation study
J. Chem. Phys., 139, 161101 - 161104, 2013. DOI: 10.1063/1.4826095
[89] K. Ishii; T. Tahara
Two-Dimensional Fluorescence Lifetime Correlation Spectroscopy. 2. Application
J. Phys. Chem. B, 117, 11423 - 11432, 2013. DOI: 10.1021/jp406864e
[88] K. Ishii; T. Tahara
Two-Dimensional Fluorescence Lifetime Correlation Spectroscopy. 1. Principle
J. Phys. Chem. B, 117, 11414 - 11422, 2013. DOI: 10.1021/jp406861u
[87] A. Kundu; H. Watanabe; S. Yamaguchi; T. Tahara
Agreement between Experimentally and Theoretically Estimated Orientational Distributions of Solutes at the Air/Water Interface
J. Phys. Chem. C, 117, 8887 - 8891, 2013. DOI: 10.1021/jp402674u
[86] K. Matsuzaki; S. Nihonyanagi; S. Yamaguchi; T. Nagata; T. Tahara
Vibrational Sum Frequency Generation by the Quadrupolar Mechanism at Nonpolar Benzene/air Interface
J. Phys. Chem. Lett., 4, 10, 1654 - 1658, 2013. DOI: 10.1021/jz400829k
[85] T. Hattori; K. Ishii; T. Tominaga; Y. Osada; T. Tahara
A fluorescence study on the local environment of hydrogels:Double-network hydrogels having extraordinarily high mechanical strength and its constituent single-network hydrogels
Chem. Phys., 419, 172 - 177, 2013. DOI: 10.1016/j.chemphys.2013.02.028
[84] S. Inada; M. Mizuno; Y. Kato; A. Kawanabe; H. Kandori; Z. Wei; S. Takeuchi; T. Tahara; Y. Mizutani
Primary structural response in tryptophan residues of anabaena sensory Rhodopsin to photochromic reactions of the retinal chromophore
Chem. Phys., 419, 65 - 73, 2013. DOI: 10.1016/j.chemphys.2013.01.031
[83] K. Shiratori; S. Yamaguchi; T. Tahara; A. Morita
Computational analysis of the quadrupole contribution in the second-harmonic generation spectroscopy for the water/vapor interface
J. Chem. Phys., 138, 064704 - 064711, 2013. DOI: 10.1063/1.4790407
[82] T. Otosu; K. Ishii; T. Tahara
Simple calibration of the counting-rate dependence of the timing shift of single photon avalanche diodes by photon interval analysis
Rev. Sci. Instrum., 84, 036105, 2013. DOI: 10.1063/1.4794769
[81] M. Iwamura; K. Nozaki; S. Takeuchi; T. Tahara
Real-time Observation of Tight Au-Au Bond Formation and Relevant Coherent Motion upon Photoexcitation of [Au(CN)2-] Oligomers
J. Am. Chem. Soc., 135, 538 - 541, 2013. DOI: 10.1021/ja310004z

2012

[80] S. Yamaguchi; A. Kundu; P. Sen; T. Tahara
Quantitative estimate of the water surface pH using heterodyne-detected electronic sum frequency generation
J. Chem. Phys., 137, 151101, 2012. DOI: 10.1063/1.4758805
[79] P. Singh; S. Nihonyanagi; S. Yamaguchi; T. Tahara
Ultrafast Vibrational Dynamics of Water at a Charged Interface Revealed by Two-Dimensional Heterodyne-Detected Vibrational Sum Frequency Generation
J. Chem. Phys., 137, 9, 094706-1 - 094706-6, 2012. DOI: 10.1063/1.4747828
[78] S. Nihonyanagi; P. Singh; S. Yamaguchi; T. Tahara
Ultrafast Vibrational Dynamics of a Charged Aqueous Interface by Femtosecond Time-Resolved Heterodyne-Detected Vibrational Sum Frequency Generation
Bull. Chem. Soc. Jpn, 85, 7, 758 - 760, 2012. DOI: 10.1246/bcsj.20120051
[77] H. Kuramochi; S. Takeuchi; T. Tahara
Ultrafast Structural Evolution of Photoactive Yellow Protein Chromophore Revealed by Ultraviolet Resonance Femtosecond Stimulated Raman Spectroscopy
J. Phys. Chem. Lett., 3, 15, 2025 - 2029, 2012. DOI: 10.1021/jz300542f
[76] J. Mondal; S. Nihonyanagi; S. Yamaguchi; T. Tahara
Three Distinct Water Structures at a Zwitterionic Lipid/Water Interface Revealed by Heterodyne-Detected Vibrational Sum Frequency Generation
J. Am. Chem. Soc., 134, 8, 7842 - 7850, 2012. DOI: 10.1021/ja300658h
[75] T. Nakamura; S. Takeuchi; T. Taketsugu; T. Tahara
Femtosecond Fluorescence Study of the Reaction Pathways and Nature of the Reactive S1 State of Cis-Stilbene
Phys. Chem. Chem. Phys., 14, 6225 - 6232, 2012. DOI: 10.1039/c2cp23959k
[74] K. Ishii; T. Tahara
Extracting decay curves of the correlated fluorescence photons measured in fluorescence correlation spectroscopy
Chem. Phys. Lett., 519-520, 130 - 133, 2012. DOI: 10.1016/j.cplett.2011.11.024

2011

[73] S. Yamaguchi; H. Watanabe; S. Mondal; A. Kundu; T. Tahara
"Up" versus "down" alignment and hydration structures of solutes at the air/water interface revealed by heterodyne-detected electronic sum frequency generation with classical molecular dynamics simulation
J. Chem. Phys., 135, 19, 194705, 2011. DOI: 10.1063/1.3662136
[72] S. Nihonyanagi; T. Ishiyama; T. Lee; S. Yamaguchi; M. Bonn; A. Morita; T. Tahara
Unified Molecular View of Air/Water Interface Based on Experimental and Theoretical χ(2) Spectra of Isotopically Diluted Water Surface
J. Am. Chem. Soc., 133, 42, 16875 - 16880, 2011. DOI: 10.1021/ja2053754
[71] Z. Wei; T. Nakamura; S. Takeuchi; T. Tahara
Tracking of the Nuclear Wavepacket Motion in Cyanine Photoisomerization by Ultrafast Pump-Dump-Probe Spectroscopy
J. Am. Chem. Soc., 133, 21, 8205 - 8210, 2011. DOI: 10.1021/ja110716b
[70] S. Yamaguchi; K. Shiratori; A. Morita; T. Tahara
Electric quadrupole contribution to the nonresonant background of sum frequency generation at air/liquid interfaces
J. Chem. Phys., 134, 18, 184705, 2011. DOI: 10.1063/1.3586811
[69] M. Iwamura; H. Watanabe; K. Ishii; S. Takeuchi; T. Tahara
Coherent Nuclear Dynamics in Ultrafast Photoinduced Structural Change of Bis(diimine)copper(I) Complex
J. Am. Chem. Soc., 133, 20, 7728 - 7736, 2011. DOI: 10.1021/ja108645x
[68] S. Yamaguchi; K. Bhattacharyya; T. Tahara
Acid-Base Equilibrium at an Aqueous Interface: pH Spectrometry by Heterodyne-Detected Electronic Sum Frequency Generation
J. Phys. Chem. C, 115, 10, 4168 - 4173, 2011. DOI: 10.1021/jp1113174
[67] S. K. Mondal; S. Yamaguchi; T. Tahara
Molecules at the Air/Water Interface Experience More Inhomogeneous Solvation Environment than in Bulk Solvents: A Quantitative Bandshape Analysis of Interfacial Electronic Spectra Obtained by HD-ESFG
J. Phys. Chem. C, 115, 7, 3083 - 3089, 2011. DOI: 10.1021/jp110456t
[66] A. Jha; K. Ishii; J. Udgaonkar; T. Tahara; G. Krishnamoorthy
Exploration of the correlation between solvation dynamics and internal dynamics of a protein
Biochemistry, 50, 3, 397 - 408, 2011. DOI: 10.1021/bi101440c

2010

[65] K. Ishii; T. Tahara
Resolving Inhomogeneity Using Lifetime-Weighted Fluorescence Correlation Spectroscopy
J. Phys. Chem. B, 114, 38, 12383 - 12391 , 2010. DOI: 10.1021/jp104234c
[64] S. Yamaguchi; H. Hosoi; M. Yamashita; P. Sen; T. Tahara
Physisorption Gives Narrower Orientational Distribution than Chemisorption on a Glass Surface: A Polarization-Sensitive Linear and Nonlinear Optical Study
J. Phys. Chem. Lett., 1, 2662 - 2665, 2010. DOI: 10.1021/jz101142m
[63] J. A. Mondal; S. Nihonyanagi; S. Yamaguchi; T. Tahara
Structure and orientation of water at charged lipid monolayer/water interfaces probed by heterodyne-detected vibrational sum frequency generation spectroscopy
J. Am. Chem. Soc., 132, 31, 10656 - 10657, 2010. DOI: 10.1021/ja104327t
[62] S. Nihonyanagi; S. Yamaguchi; T. Tahara
Water hydrogen bond structure near highly charged interfaces is not like ice
J. Am. Chem. Soc., 132, 20, 6867 - 6869, 2010. DOI: 10.1021/ja910914g
[61] H. Watanabe; S. Yamaguchi; S. Sen; A. Morita; T. Tahara
Half hydration at the air/water interface revealed by heterodyne-detected electronic sum frequency generation spectroscopy, polarization second harmonic generation, and molecular dynamics simulation
J. Chem. Phys., 132, 14, 144701, 2010. DOI: 10.1063/1.3372620
[60] P. Sen; S. Yamaguchi; T. Tahara
Ultrafast dynamics of malachite green at the air/water interface studied by femtosecond time-resolved electronic sum frequency generation (TR-ESFG): an indicator for local viscosity
Faraday Discuss., 145, 411 - 428, 2010. DOI: 10.1039/b908097j

2009

[59] K. Ono; J. K. Klosterman; M. Yoshizawa; K. Sekiguchi; T. Tahara; M. Fujita
ON/OFF Red Emission from Azaporphine in a Coordination Cage in Water
J. Am. Chem. Soc., 131, 35, 12526 - 12527, 2009. DOI: 10.1021/ja904875y
[58] K. Ishii; S. Takeuchi; T. Tahara
Infrared-induced coherent vibration of a hydrogen-bonded system: Effects of mechanical and electrical anharmonic couplings
J. Chem. Phys., 131, 4, 044512, 2009. DOI: 10.1063/1.3181777
[57] K. Nakashima; T. Nakamura; S. Takeuchi; M. Shibata; M. Demura; T. Tahara; H. Kandori
Property of Anion Binding Site of pharaonis Halorhodopsin Studied by Ultrafast Pump-Probe Spectroscopy and Low-Temperature FTIR Spectroscopy
J. Phys. Chem. B, 113, 24, 8429 - 8434, 2009. DOI: 10.1021/jp902596k
[56] J. K. Klosterman; M. Iwamura; T. Tahara; M. Fujita
Energy Transfer in a Mechanically Trapped Exciplex
J. Am. Chem. Soc., 131, 27, 9478 - 9479, 2009. DOI: 10.1021/ja901674g
[55] S. Sen; S. Yamaguchi; T. Tahara
Different molecules experience different polarity at the air/water interface
Angew. Chem. Int. Ed., 48, 35, 6439 - 6442, 2009. DOI: 10.1002/anie.200901094
[54] S. Nihonyanagi; S. Yamaguchi; T. Tahara
Direct evidence for orientational flip-flop of water molecules at charged interfaces: a heterodyne-detected vibrational sum frequency generation study
J. Chem. Phys., 130, 20, 204704, 2009. DOI: 10.1063/1.3135147
[53] D. Mandal; H. Hosoi; U. Chatterjee; T. Tahara
Direct observation of time-dependent photoluminescence spectral shift in CdS nanoparticles synthesized in polymer solutions
J. Chem. Phys., 130, 3, 034902, 2009. DOI: 10.1063/1.3058590
[52] T. Sakamaki; T. Fujino; H. Hosoi; T. Tahara; T. Korenaga
Picosecond time-resolved fluorescence study of poly vinyl methyl ether aqueous solution
Chem. Phys. Lett., 468, 4-6, 171 - 175, 2009. DOI: 10.1016/j.cplett.2008.11.091

2008

[51] T. Fujino; K. Hirota; K. Ohta; T. Tahara
In-cell viscosity measurement using a fluorescence up-conversion microscope
Chem. Lett., 37, 12, 1240 - 1241, 2008. DOI: 10.1246/cl.2008.1240
[50] T. Nakamura; S. Takeuchi; N. Suzuki; T. Tahara
Revised Steady-State Fluorescence Spectrum and Nature of the Reactive S1 State of cis-Stilbene in Solution
Chem. Phys. Lett., 465, 4-6, 212 - 215, 2008. DOI: 10.1016/j.cplett.2008.09.076
[49] P. Sen; S. Yamaguchi; T. Tahara
New Insight into the Surface Denaturation of Proteins: Electronic Sum Frequency Generation Study of Cytochrome C at Water Interfaces
J. Phys. Chem. B, 112, 43, 13473 - 13475, 2008. DOI: 10.1021/jp8061288
[48] T. Sakamaki; T. Fujino; H. Hosoi; T. Tahara; T. Korenaga
Solvation Structure of Polyacrylamide Fine Particle Surfaces Studied by Picosecond Time-resolved Fluorescence Spectroscopy
Chem. Lett., 37, 9, 980 - 981, 2008. DOI: 10.1246/cl.2008.980
[47] S. Yamaguchi; T. Tahara
Heterodyne-Detected Electronic Sum Frequency Generation: 'Up' vs 'Down' Alignment of Interfacial Molecules
J. Chem. Phys., 129, 10, 101102, 2008. DOI: 10.1063/1.2981179
[46] S. Takeuchi; S. Ruhman; T. Tsuneda; M. Chiba; T. Taketsugu; T. Tahara
Spectroscopic Tracking of Structural Evolution in Ultrafast Stilbene Photoisomerization
Science, 322, 5904, 1073 - 1077, 2008. DOI: 10.1126/science.1160902
[45] T. Nakamura; S. Takeuchi; M. Shibata; M. Demura; H. Kandori; T. Tahara
Ultrafast Pump-Probe Study of the Primary Photoreaction Process in pharaonis Halorhodopsin: Halide-Ion Dependence and Isomerization Dynamics
J. Phys. Chem. B, 112, 40, 12795 - 12800, 2008. DOI: 10.1021/jp803282s
[44] S. Yamaguchi; T. Tahara
Coherent Acoustic Phonons in a Thin Gold Film Probed by Femtosecond Surface Plasmon Resonance
J. Raman Spectrosc., 39, 11, 1703 - 1706, 2008. DOI: 10.1002/jrs.2078
[43] H. Hosoi; S. Yamaguchi; H. Mizuno; A. Miyawaki; T. Tahara
Hidden Electronic State of Enhanced Green Fluorescent Protein
J. Phys. Chem. B, 112, 10, 2761 - 2763, 2008. DOI: 10.1021/jp711628u
[42] K. Sekiguchi; S. Yamaguchi; T. Tahara
Femtosecond Time-Resolved Electronic Sum-Frequency Generation (TR-ESFG) Spectroscopy: A New Method to Investigate Ultrafast Dynamics at Liquid Interfaces
J. Chem. Phys., 128, 11, 114715, 2008. DOI: 10.1063/1.2841023
[41] K. Ishii; S. Takeuchi; T. Tahara
Pronounced Non-Condon Effect as the Origin of the Quantum Beat Observed in the Time-Resolved Absorption Signal from Excited-State cis-Stilbene
J. Phys. Chem. A, 112, 11, 2219 - 2227, 2008. DOI: 10.1021/jp077402e

2007

[40] S. Yamaguchi; T. Tahara
χ(4) Raman Spectroscopy for Buried Water Interfaces
Angew. Chem. Int. Ed., 46, 40, 7609 - 7612, 2007. DOI: 10.1002/anie.200701609
[39] T. Nomoto; H. Hosoi; T. Fujino; T. Tahara; H. Hamaguchi
Excited-State Structure and Dynamics of 1,3,5-Tris(phenylethynyl)benzene as Studied by Raman and Time-Resolved Fluorescence Spectroscopy
J. Phys. Chem. A, 111, 15, 2907 - 2912, 2007. DOI: 10.1021/jp068379k
[38] M. Iwamura; S. Takeuchi; T. Tahara
Real-Time Observation of the Photoinduced Structural Change of bis(2,9-dimethyl-1,10-phenanthroline)copper (I) by Femtosecond Fluorescence Spectroscopy: A Realistic Potential Curve of the Jahn-Teller Distortion
J. Am. Chem. Soc., 129, 16, 5248 - 5256, 2007. DOI: 10.1021/ja069300s
[37] S. Takeuchi; T. Tahara
The answer to concerted versus step-wise controversy for the double proton transfer mechanism of 7-azaindole dimer in solution
Proc. Natl. Acad. Sci. USA, 104, 13, 5285 - 5290, 2007. DOI: 10.1073/pnas.0610141104
[36] D. Nanjo; H. Hosoi; T. Fujino; T. Tahara; T. Korenaga
Femtosecond/picosecond time-resolved fluorescence study of hydrophilic polymer fine particles
J. Phys. Chem. B, 111, 11, 2759 - 2764, 2007. DOI: 10.1021/jp0664871

2006

[35] S. Yamaguchi; T. Tahara
Determining electronic spectra at interfaces by electronic sum frequency generation: One- and two-photon double resonant oxazine 750 at the air/water interface
J. Chem. Phys., 125, 19, 194711, 2006. DOI: 10.1063/1.2375093
[34] H. Hosoi; H. Mizuno; A. Miyawaki; T. Tahara
Competition between energy and proton transfer in ultrafast excited-state dynamics of an oligomeric fluorescent protein red Kaede
J. Phys. Chem. B, 110, 22853 - 22860, 2006. DOI: 10.1021/jp064489f
[33] Y. Kikuzawa; T. Nagata; T. Tahara; K. Ishii
Photo- and Redox Active Dendritic Molecules with Soft, Layered Nanostructures
Chem. Asian J., 1, 516 - 528 , 2006. DOI: 10.1002/asia.200600134
[32] S. Shimozono; H. Hosoi; H. Mizuno; T. Fukano; T. Tahara; A. Miyawaki
Concatenation of Cyan and Yellow Fluorescent Proteins for Efficient Resonance Energy Transfer
Biochemistry, 45, 6267 - 6271, 2006. DOI: 10.1021/bi060093i
[31] T. Tahara; S. Takeuchi; K. Ishii
Observation of nuclear wavepacket motion of reacting excited states in solution
J. Chin. Chem. Soc., 53, 1, 181 - 189 , 2006. DOI: 10.1002/jccs.200600020
[30] K. Sekiguchi; S. Yamaguchi; T. Tahara
Formation and Dissociation of Rhodamine 800 Dimers in Water: Steady-State and Ultrafast Spectroscopic Study
J. Phys. Chem. A, 110, 8, 2601 - 2606, 2006. DOI: 10.1021/jp055027p
[29] K. Ishii; S. Takeuchi; T. Tahara
A 35-fs Time-resolved Absorption Study of All-trans Retinal in a Nonpolar Solvent: Ultrafast Photophysics Revisited
Chem. Phys. Lett., 418, 4-6, 307 - 310, 2006. DOI: 10.1016/j.cplett.2005.11.002

2005

[28] S. Yamaguchi; T. Tahara
Interface-Specific χ(4) Coherent Raman Spectroscopy in the Frequency Domain
J. Phys. Chem. B, 109, 51, 24211 - 24214 , 2005. DOI: 10.1021/jp0542064
[27] S. Takeuchi; T. Tahara
Coherent Nuclear Wavepacket Motions in Ultrafast Excited-State Intramolecular Proton Transfer: Sub-30-fs Resolved Pump-Probe Absorption Spectroscopy of 10-Hydroxybenzo[h]quinoline in Solution
J. Phys. Chem. A, 109, 45, 10199 - 10207, 2005. DOI: 10.1021/jp0519013
[26] T. Fujino; T. Fujima; T. Tahara
Picosecond time-resolved imaging by nonscanning fluorescence Kerr gate microscope
Appl. Phys. Lett., 87, 131105, 2005. DOI: 10.1063/1.2067694
[25] T. Fujino; T. Fujima; T. Tahara
Femtosecond Fluorescence Dynamics Imaging Using a Fluorescence Up-Conversion Microscope
J. Phys. Chem. B, 109, 32, 15327 - 15331, 2005. DOI: 10.1021/jp0516083
[24] M. Mizuno; S. Yamaguchi; T. Tahara
Relaxation Dynamics of the Hydrated Electron: Femtosecond Time-Resolved Resonance Raman and Luminescence Study
J. Phys. Chem. A, 109, 24, 5257 - 5265, 2005. DOI: 10.1021/jp050828d
[23] H. Hosoi; S. Yamaguchi; T. Tahara
Host to Guest Energy Transfer in a Self-assembled Supramolecular Nanocage Observed by Picosecond Fluorescence Quenching
Chem. Lett., 34, 4, 618, 2005. DOI: 10.1246/cl.2005.618
[22] D. Mandal; M. Mizuno; T. Tahara
Temporal Fluorescence Rejection in Raman Spectroscopy Using Femtosecond Up-Conversion with Single- and Multi-Channel Detection
J. Mol Struct., 735/736, 189 - 195, 2005. DOI: 10.1016/j.molstruc.2004.10.113

2004

[21] S. Yamaguchi; T. Tahara
Precise Electronic χ(2) Spectra of Molecules Adsorbed at an Interface Measured by Multiplex Sum Frequency Generation
J. Phys. Chem. B, 108, 19079 - 19082, 2004. DOI: 10.1021/jp045306x
[20] K. Ishii; S. Takeuchi; T. Tahara
A 40-fs Time-Resolved Absorption Study on cis-Stilbene in Solution: Observation of Wavepacket Motion on the Reactive Excited State
Chem. Phys. Lett., 398, 400 - 406, 2004. DOI: 10.1016/j.cplett.2004.09.075
[19] S. Fujiyoshi; S. Takeuchi; T. Tahara
Time-Resolved Impulsive Stimulated Raman Studies of 1,1'-Binaphtyl in the Excited-State: Low-Frequency Vibrations and Conformational Relaxation
J. Phys. Chem. A, 108, 5938 - 5943, 2004. DOI: 10.1021/jp048968v
[18] T. Fujino; T. Tahara
Characterization and Performance of the Femtosecond Fluorescence Up-conversion Microscope
Appl. Phys. B, 79, 145 - 151, 2004. DOI: 10.1007/s00340-004-1538-y
[17] S. Yamaguchi; T. Tahara
Observation of an Optically Forbidden State of C60 by Nondegenerate Two-Photon Absorption Spectroscopy
Chem. Phys. Lett., 390, 136 - 139, 2004. DOI: 10.1016/j.cplett.2004.03.146
[16] S. Takeuchi; T. Tahara
Femtosecond Absorption Study of Photodissociation of Diphenylcyclopropenone in Solution: Reaction Dynamics and Coherent Nuclear Motion
J. Chem. Phys., 120, 4768 - 4776, 2004. DOI: 10.1063/1.1645778
[15] S. Takeuchi; T. Tahara
Time-Wavelength Two-Dimensional Femtosecond Fluorescence Imaging
Opt. Lett., 29, 313 - 315, 2004. DOI: 10.1364/OL.29.000313
[14] D. Mandal; T. Tahara; S. R. Meech
Excited State Dynamics in the Green Fluorescent Protein Chromophore
J. Phys. Chem. B, 108, 1102 - 1108, 2004. DOI: 10.1021/jp035816b

2003

[13] S. Yamaguchi; T. Tahara
Two-Photon Absorption Spectrum of all-trans Retinal
Chem. Phys. Lett., 376, 237 - 243, 2003. DOI: 10.1016/S0009-2614(03)00984-9
[12] T. Fujino; T. Tahara
Femtosecond Fluorescence Up-Conversion Microscopy: Exciton Dynamics in α-Perylene Microcrystal
J. Phys. Chem. B, 107, 5120 - 5122 , 2003. DOI: 10.1021/jp034037s
[11] M. Mizuno; T. Tahara
Picosecond Time-Resolved Resonance Raman Study of the Solvated Electron in Water
J. Phys. Chem. A, 107, 2411 - 2421, 2003. DOI: 10.1021/jp022030p
[10] S. Fujiyoshi; S. Takeuchi; T. Tahara
Time-Resolved Impulsive Stimulated Raman Scattering from Excited-State Polyatomic Molecules in Solution
J. Phys. Chem. A, 107, 494 - 500, 2003. DOI: 10.1021/jp0270856

2002

[9] S. Takeuchi; S. Fujiyoshi; T. Tahara
Excited-State Vibrational Coherence of Solution-Phase Molecules Observed in the Third-Order Optical Process using Extremely Short Pulses
RIKEN REVIEW, 49, 28 - 32, 2002. http://www.riken.go.jp/lab-www/library/publication/review/pdf/No_49/49_028.pdf
[8] D. Mandal; S. Sen; K. Bhattacharyya; T. Tahara
Femtosecond Study of Solvation Dynamics of DCM in Micelles
Chem. Phys. Lett., 359, 77 - 82, 2002. DOI: 10.1016/S0009-2614(02)00704-2
[7] D. Mandal; T. Tahara; N. M. Webber; S. R. Meech
Ultrafast Fluorescence of the Chromophore of the Green Fluorescent Protein in Alcohol Solutions
Chem. Phys. Lett., 358, 495 - 501, 2002. DOI: 10.1016/S0009-2614(02)00650-4
[6] T. Fujino; S. Yu. Arzhantsev; T. Tahara
Femtosecond/Picosecond Time-Resolved Spectroscopy of trans-Azobenzene: Isomerization Mechanism Following S2(ππ*) ← S0 Photoexcitation;
Bull. Chem. Soc. Jpn., 75, 1031 - 1040, 2002. DOI: 10.1246/bcsj.75.1031
[5] M. Mizuno; H. Hamaguchi; T. Tahara
Observation of Resonance Hyper-Raman Scattering of all-trans Retinal
J. Phys. Chem. A, 106, 3599 - 3604, 2002. DOI: 10.1021/jp013174r

2001

[4] K. Iwata; S. Takeuchi; T. Tahara
Photochemical Bimolecular Reaction between Biphenyl and Carbon Tetrachloride: Observed Ultrafast Kinetics and Diffusion-Controlled Reaction Model
Chem. Phys. Lett., 347, 331 - 336, 2001. DOI: 10.1016/S0009-2614(01)01047-8
[3] S. Takeuchi; T. Tahara
Excitation-Wavelength Dependence of the Femtosecond Fluorescence Dynamics of 7-Azaindole Dimer: Further Evidence for the Concerted Double Proton Transfer in Solution
Chem. Phys. Lett., 347, 108 - 114, 2001. DOI: 10.1016/S0009-2614(01)01025-9
[2] M. Mizuno; T. Tahara
Novel Resonance Raman Enhancement of Local Structure around Solvated Electrons in Water
J. Phys. Chem. A, 105, 8823 - 8826, 2001. DOI: 10.1021/jp0119173
[1] T. Fujino; S. Yu. Arzhantsev; T. Tahara
Femtosecond Time-Resolved Fluorescence Study of Photoisomerization of trans-Azobenzene
J.Phys. Chem. A, 105, 8123 - 8129, 2001. DOI: 10.1021/jp0110713